Structure of PDB 4yan Chain D Binding Site BS01
Receptor Information
>4yan Chain D (length=251) Species:
627192
(Sphingobium sp. SYK-6) [
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NNTITLYDLQLESGCTISPYVWRTKYALKHKGFDIDIVPGGFTGILERTG
GRSERVPVIVDDGEWVLDSWVIAEYLDEKYPDRPMLFEGPTQKNLMKFLD
NWLWSTAVGPWFRCYILDYHDLSLPQDRDYVRWSREQWFLGGQRLEDVQA
GREDRLPLVPPTLEPFRRILAETKWLGGDQPNFADYSALAVFLWTASVAR
TPPLTEDDPLRDWLDRGFDLFDGLGRHPGMNPLFGLKLREGDPEPFVRQT
G
Ligand information
Ligand ID
GSH
InChI
InChI=1S/C10H17N3O6S/c11-5(10(18)19)1-2-7(14)13-6(4-20)9(17)12-3-8(15)16/h5-6,20H,1-4,11H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)/t5-,6-/m0/s1
InChIKey
RWSXRVCMGQZWBV-WDSKDSINSA-N
SMILES
Software
SMILES
ACDLabs 12.01
O=C(NCC(=O)O)C(NC(=O)CCC(C(=O)O)N)CS
OpenEye OEToolkits 1.7.6
C(CC(=O)N[C@@H](CS)C(=O)NCC(=O)O)[C@@H](C(=O)O)N
CACTVS 3.370
N[CH](CCC(=O)N[CH](CS)C(=O)NCC(O)=O)C(O)=O
CACTVS 3.370
N[C@@H](CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O)C(O)=O
OpenEye OEToolkits 1.7.6
C(CC(=O)NC(CS)C(=O)NCC(=O)O)C(C(=O)O)N
Formula
C10 H17 N3 O6 S
Name
GLUTATHIONE
ChEMBL
CHEMBL1543
DrugBank
DB00143
ZINC
ZINC000003830891
PDB chain
4yan Chain D Residue 300 [
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Receptor-Ligand Complex Structure
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PDB
4yan
Structural Basis of Stereospecificity in the Bacterial Enzymatic Cleavage of beta-Aryl Ether Bonds in Lignin.
Resolution
2.593 Å
Binding residue
(original residue number in PDB)
L12 Y23 R58 V59 D71 S72 Y133 R138
Binding residue
(residue number reindexed from 1)
L9 Y20 R55 V56 D68 S69 Y130 R135
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:4yan
,
PDBe:4yan
,
PDBj:4yan
PDBsum
4yan
PubMed
26637355
UniProt
G2IN93
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