Structure of PDB 4wdi Chain D Binding Site BS01
Receptor Information
>4wdi Chain D (length=277) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MGPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRA
PWMEQEGPEYWEEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMF
GCDVGSDWRLLRGYHQFAYDGRDYIALNEDLKTWTAADTAALITRRKWEQ
AGDAEYYRAYLEGECVEWLRRYLELGNETLLRTDSPKAHVTYHPRSQVDV
TLRCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGTFQKWAAVVV
PLGKEQNYTCHVHHKGLPEPLTLRWKP
Ligand information
>4wdi Chain F (length=9) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
LYLVCGERG
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4wdi
Distortion of the Major Histocompatibility Complex Class I Binding Groove to Accommodate an Insulin-derived 10-Mer Peptide.
Resolution
2.313 Å
Binding residue
(original residue number in PDB)
Y7 V9 Q63 R66 D70 W73 T80 Y84 R97 F99 T143 W147 D152 Y155 Y156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y8 V10 Q64 R67 D71 W74 T81 Y85 R98 F100 T144 W148 D153 Y156 Y157 Y160 W168 Y172
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:4wdi
,
PDBe:4wdi
,
PDBj:4wdi
PDBsum
4wdi
PubMed
26085090
UniProt
P01902
|HA1D_MOUSE H-2 class I histocompatibility antigen, K-D alpha chain (Gene Name=H2-K1)
[
Back to BioLiP
]
