Structure of PDB 4m0v Chain D Binding Site BS01

Receptor Information
>4m0v Chain D (length=345) Species: 595495 (Escherichia coli KO11FL) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MDIEFMRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIV
AGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRD
IMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLN
GIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDA
VRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLS
FDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ
WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain4m0v Chain D Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4m0v Structural basis for DNA recognition and nuclease processing by the Mre11 homologue SbcD in double-strand breaks repair.
Resolution1.83 Å
Binding residue
(original residue number in PDB)		D48 N83 H184 H222
Binding residue
(residue number reindexed from 1)		D53 N88 H189 H227
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Nov 24 22:26:35 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4m0v', asym_id = 'D', bs = 'BS01', title = 'Structural basis for DNA recognition and nucleas...11 homologue SbcD in double-strand breaks repair.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='4m0v', asym_id='D', bs='BS01', title='Structural basis for DNA recognition and nucleas...11 homologue SbcD in double-strand breaks repair.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0004519,0006259,0008408,0016787', uniprot = '', pdbid = '4m0v', asym_id = 'D'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004519,0006259,0008408,0016787', uniprot='', pdbid='4m0v', asym_id='D')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>