Structure of PDB 3vyl Chain D Binding Site BS01

Receptor Information
>3vyl Chain D (length=297) Species: 381 (Mesorhizobium loti) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MARIGIHSFVWSASSAQSELERTLANTRDAGFDLIEFSYLDPADVDIGRL
AKRIADLGLGVAISIGLPADGDISSADKAVAARGVEILNQTIALTRDLGG
RKVAGILSAGHGLQVEAPTRDQWNRSAAALAKVAETAKAAGVTLNLEIVN
RFESNLLNTAAQGLAFIEDTGSDNIFLHLDTFHMNIEEADVGLAIRHAAG
KIGYVHIGESHRGFLGTGNIDFAAIFDALTAIGYADDLSFESFSSEIVDE
NLSKKTAIWRNLWTDNMALAKHARAFIGLGLETARRKAELVSARHKP
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain3vyl Chain D Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3vyl Structural insight into L-ribulose 3-epimerase from Mesorhizobium loti.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		E147 D180 H206 E241
Binding residue
(residue number reindexed from 1)		E147 D180 H206 E241
Annotation score4
Enzymatic activity
Enzyme Commision number 5.3.1.-
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:3vyl, PDBe:3vyl, PDBj:3vyl
PDBsum3vyl
PubMed24311575
UniProtN0DP12

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