Structure of PDB 3veh Chain D Binding Site BS01

Receptor Information
>3veh Chain D (length=439) Species: 1773 (Mycobacterium tuberculosis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AVSTASSSIPMPAGVNPADLAAELAAVVTESVDEDYLLYECDGQWVLAAG
VQAMVELDSDELRVIRDGVTRRQQWSGRPGAALGEAVDRLLLETDQAFGW
VAFEFGVHRYGLQQRLAPHTPLARVFSPRTRIMVSEKEIRLFDAGIRHRE
AIDRLLATGVREVPQSRSVDVSDDPSGFRRRVAVAVDEIAAGRYHKVILS
RCVEVPFAIDFPLTYRLGRRHNTPVRSFLLQLGGIRALGYSPELVTAVRA
DGVVITEPLAGTRALGRGPADRLARDDLESNSKEIVEHAISVRSSLEEIT
DIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAV
TASGIPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRAAYQV
GGRTWLRAGAGIIEESEPEREFEETCEKLSTLTPYLVAR
Ligand information
Ligand ID0GA
InChIInChI=1S/C11H10O6/c1-2-7(11(15)16)17-8-5-3-4-6(9(8)12)10(13)14/h2-5,12H,1H3,(H,13,14)(H,15,16)/b7-2-
InChIKeyMPHSNGOSXHODDD-UQCOIBPSSA-N
SMILES
SoftwareSMILES
CACTVS 3.370CC=C(Oc1cccc(C(O)=O)c1O)C(O)=O
OpenEye OEToolkits 1.7.6CC=C(C(=O)O)Oc1cccc(c1O)C(=O)O
OpenEye OEToolkits 1.7.6C/C=C(/C(=O)O)\Oc1cccc(c1O)C(=O)O
CACTVS 3.370C/C=C(Oc1cccc(C(O)=O)c1O)/C(O)=O
ACDLabs 12.01O=C(O)c1cccc(O/C(C(=O)O)=C\C)c1O
FormulaC11 H10 O6
Name3-{[(1Z)-1-carboxyprop-1-en-1-yl]oxy}-2-hydroxybenzoic acid
ChEMBLCHEMBL4171648
DrugBank
ZINCZINC000095920611
PDB chain3veh Chain D Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3veh Implications of binding mode and active site flexibility for inhibitor potency against the salicylate synthase from Mycobacterium tuberculosis.
Resolution2.0 Å
Binding residue
(original residue number in PDB)		T271 H334 T361 Y385 L404 A418 G419 K438
Binding residue
(residue number reindexed from 1)		T262 H324 T351 Y375 L394 A408 G409 K428
Annotation score1
Binding affinityMOAD: Ki=11uM
Enzymatic activity
Catalytic site (original residue number in PDB) K205 E252 A269 E297 H334 T361 Y385 R405 G421 E434 K438
Catalytic site (residue number reindexed from 1) K196 E243 A260 E287 H324 T351 Y375 R395 G411 E424 K428
Enzyme Commision number 4.2.99.21: isochorismate lyase.
5.4.4.2: isochorismate synthase.
5.4.99.5: chorismate mutase.
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004106 chorismate mutase activity
GO:0008909 isochorismate synthase activity
GO:0016829 lyase activity
GO:0016833 oxo-acid-lyase activity
GO:0016853 isomerase activity
GO:0043904 isochorismate pyruvate lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0000162 tryptophan biosynthetic process
GO:0009058 biosynthetic process
GO:0009697 salicylic acid biosynthetic process
GO:0010106 cellular response to iron ion starvation
GO:0019540 catechol-containing siderophore biosynthetic process
GO:0052572 response to host immune response
Cellular Component
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3veh, PDBe:3veh, PDBj:3veh
PDBsum3veh
PubMed22607697
UniProtP9WFX1|MBTI_MYCTU Salicylate synthase (Gene Name=mbtI)

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