Structure of PDB 3td5 Chain D Binding Site BS01
Receptor Information
>3td5 Chain D (length=120) Species:
470
(Acinetobacter baumannii) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGH
TDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADN
KTKEGRAMNRRVFATITGSR
Ligand information
>3td5 Chain L (length=5) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
AEKAA
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3td5
Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
T236 N237 T270 D271 T273 L278 N279 L282 R286 R325 R329
Binding residue
(residue number reindexed from 1)
T17 N18 T51 D52 T54 L59 N60 L63 R67 R106 R110
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Cellular Component
GO:0016020
membrane
View graph for
Cellular Component
External links
PDB
RCSB:3td5
,
PDBe:3td5
,
PDBj:3td5
PDBsum
3td5
PubMed
21965596
UniProt
Q6RYW5
|OMP38_ACIB2 Outer membrane protein Omp38 (Gene Name=omp38)
[
Back to BioLiP
]