Structure of PDB 3p9y Chain D Binding Site BS01
Receptor Information
>3p9y Chain D (length=191) Species:
7227
(Drosophila melanogaster) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SKLAVAVVDSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPN
VYEFGTKYEDIYRDLESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTKE
QFDIIVTVEERVYDLVVMHMESMESVDNRPVHVLNVDVVNNAEDALMGAF
VITDMINMMAKSTDLDNDIDELIQEFEERRKRVILHSVLFY
Ligand information
>3p9y Chain H (length=7) Species:
32630
(synthetic construct) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
PTSPSYS
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3p9y
cis-Proline-mediated Ser(P)5 Dephosphorylation by the RNA Polymerase II C-terminal Domain Phosphatase Ssu72.
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
D13 S14 S15 M17 N18 R19 K44 L45 P46 A49 M85 N144
Binding residue
(residue number reindexed from 1)
D9 S10 S11 M13 N14 R15 K40 L41 P42 A45 M81 N140
Enzymatic activity
Enzyme Commision number
3.1.3.16
: protein-serine/threonine phosphatase.
Gene Ontology
Molecular Function
GO:0004721
phosphoprotein phosphatase activity
GO:0004722
protein serine/threonine phosphatase activity
GO:0008420
RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0016791
phosphatase activity
GO:0017018
myosin phosphatase activity
Biological Process
GO:0006357
regulation of transcription by RNA polymerase II
GO:0006369
termination of RNA polymerase II transcription
GO:0006397
mRNA processing
GO:0031124
mRNA 3'-end processing
Cellular Component
GO:0005634
nucleus
GO:0005847
mRNA cleavage and polyadenylation specificity factor complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3p9y
,
PDBe:3p9y
,
PDBj:3p9y
PDBsum
3p9y
PubMed
21159777
UniProt
Q9VWE4
[
Back to BioLiP
]