Structure of PDB 3p9m Chain D Binding Site BS01
Receptor Information
>3p9m Chain D (length=277) Species:
10090
(Mus musculus) [
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GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVP
LGKEQYYTCHVYHQGLPEPLTLRWEPP
Ligand information
>3p9m Chain C (length=8) Species:
9031
(Gallus gallus) [
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SIIGFEKL
Receptor-Ligand Complex Structure
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PDB
3p9m
Affinity thresholds for naive CD8+ CTL activation by peptides and engineered influenza A viruses
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
Y7 E24 E63 K66 N70 S73 F74 D77 Y84 Y116 T143 K146 W147 R155 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 E24 E63 K66 N70 S73 F74 D77 Y84 Y116 T143 K146 W147 R155 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3p9m
,
PDBe:3p9m
,
PDBj:3p9m
PDBsum
3p9m
PubMed
22039305
UniProt
P01901
|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)
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