Structure of PDB 2znz Chain D Binding Site BS01

Receptor Information
>2znz Chain D (length=146) Species: 53953 (Pyrococcus horikoshii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LDEIDKKIIKILQNDGKAPLREISKITGLAESTIHERIRKLRESGVIKKF
TAIIDPEALGYSMLAFILVKVKAGKYSEVASNLAKYPEIVEVYETTGDYD
MVVKIRTKNSEELNNFLDLIGSIPGVEGTHTMIVLKTHKETTELPI
Ligand information
Ligand IDLYS
InChIInChI=1S/C6H14N2O2/c7-4-2-1-3-5(8)6(9)10/h5H,1-4,7-8H2,(H,9,10)/p+1/t5-/m0/s1
InChIKeyKDXKERNSBIXSRK-YFKPBYRVSA-O
SMILES
SoftwareSMILES
CACTVS 3.341N[CH](CCCC[NH3+])C(O)=O
ACDLabs 10.04O=C(O)C(N)CCCC[NH3+]
OpenEye OEToolkits 1.5.0C(CC[NH3+])C[C@@H](C(=O)O)N
CACTVS 3.341N[C@@H](CCCC[NH3+])C(O)=O
OpenEye OEToolkits 1.5.0C(CC[NH3+])CC(C(=O)O)N
FormulaC6 H15 N2 O2
NameLYSINE
ChEMBL
DrugBank
ZINC
PDB chain2znz Chain D Residue 172 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2znz Interactions between the archaeal transcription repressor FL11 and its coregulators lysine and arginine.
Resolution2.39 Å
Binding residue
(original residue number in PDB)		N138 L141 T153 T155
Binding residue
(residue number reindexed from 1)		N114 L117 T129 T131
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0043200 response to amino acid
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2znz, PDBe:2znz, PDBj:2znz
PDBsum2znz
PubMed19004003
UniProtO59188|REG6_PYRHO HTH-type transcriptional regulator FL11 (Gene Name=fl11)

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