Structure of PDB 2oif Chain D Binding Site BS01

Receptor Information
>2oif Chain D (length=152) Species: 4513 (Hordeum vulgare) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VFSEEKEALVLKSWAIMKKDSANLGLRFFLKIFEIAPSARQMFPFLRDSD
VPLETNPKLKTHAVSVFVMTCEAAAQLRKAGKITVRETTLKRLGGTHLKY
GVADGHFEVTRFALLETIKEALPADMWGPEMRNAWGEAYDQLVAAIKQEM
KP
Ligand information
Ligand IDCYN
InChIInChI=1S/CN/c1-2/q-1
InChIKeyXFXPMWWXUTWYJX-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[C-]#N
FormulaC N
NameCYANIDE ION
ChEMBL
DrugBank
ZINC
PDB chain2oif Chain D Residue 204 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2oif Plant hemoglobins: a molecular fossil record for the evolution of oxygen transport
Resolution1.8 Å
Binding residue
(original residue number in PDB)		F37 F51 H70
Binding residue
(residue number reindexed from 1)		F29 F43 H62
Annotation score1
Enzymatic activity
Enzyme Commision number 1.7.2.-
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0019825 oxygen binding
GO:0020037 heme binding
GO:0046872 metal ion binding
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:2oif, PDBe:2oif, PDBj:2oif
PDBsum2oif
PubMed17560601
UniProtQ42831|HBL_HORVU Anaerobic nitrite reductase GLB1 (Gene Name=HB)

[Back to BioLiP]