Structure of PDB 2jc3 Chain D Binding Site BS01
Receptor Information
>2jc3 Chain D (length=293) [
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MNTLEQTIGNTPLVKLQRIGPDNGSEIWVKLEGNNPAGSVKDRAALSMIV
EAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERR
AAMRAYGAELILVTKEQGMEGARDLALAMSERGEGKLLDQFNNPDNPYAH
YTTTGPEIWRQTSGRITHFVSSMGTTGTITGVSRFLREQEKPVTIVGLQP
EEGSSIPGIRRWPAEYMPGIFNASLVDEVLDIHQNDAENTMRELAVREGI
FCGVSSGGAVAGALRVARATPGAIVVAIICDRGDRYLSTGVFG
Ligand information
Ligand ID
PLP
InChI
InChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKey
NGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0
Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04
O=P(O)(O)OCc1cnc(c(O)c1C=O)C
Formula
C8 H10 N O6 P
Name
PYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBL
CHEMBL82202
DrugBank
DB00114
ZINC
ZINC000001532514
PDB chain
2jc3 Chain D Residue 1294 [
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Receptor-Ligand Complex Structure
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PDB
2jc3
Structure, Mechanism, and Conformational Dynamics of O-Acetylserine Sulfhydrylase from Salmonella Typhimurium: Comparison of a and B Isozymes.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
K41 N71 G174 T175 T176 T178 G208 S255 C280
Binding residue
(residue number reindexed from 1)
K41 N71 G174 T175 T176 T178 G208 S255 C280
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.5.1.47
: cysteine synthase.
Gene Ontology
Molecular Function
GO:0004124
cysteine synthase activity
GO:0016740
transferase activity
GO:0016765
transferase activity, transferring alkyl or aryl (other than methyl) groups
Biological Process
GO:0006535
cysteine biosynthetic process from serine
GO:0019344
cysteine biosynthetic process
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2jc3
,
PDBe:2jc3
,
PDBj:2jc3
PDBsum
2jc3
PubMed
17583914
UniProt
P29848
|CYSM_SALTY Cysteine synthase B (Gene Name=cysM)
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