Structure of PDB 2h27 Chain D Binding Site BS01
Receptor Information
>2h27 Chain D (length=69) Species:
83333
(Escherichia coli K-12) [
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MLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVR
SRIFRAREAIDNKVQPLIR
Ligand information
>2h27 Chain E (length=12) [
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cccggaacttcg
Receptor-Ligand Complex Structure
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PDB
2h27
The structural basis for promoter -35 element recognition by the group IV sigma factors.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
P139 P166 G168 T169 S172 R173 R176
Binding residue
(residue number reindexed from 1)
P18 P45 G47 T48 S51 R52 R55
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0016987
sigma factor activity
Biological Process
GO:0006352
DNA-templated transcription initiation
GO:0006355
regulation of DNA-templated transcription
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Molecular Function
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Biological Process
External links
PDB
RCSB:2h27
,
PDBe:2h27
,
PDBj:2h27
PDBsum
2h27
PubMed
16903784
UniProt
P0AGB6
|RPOE_ECOLI ECF RNA polymerase sigma-E factor (Gene Name=rpoE)
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