Structure of PDB 2bht Chain D Binding Site BS01
Receptor Information
>2bht Chain D (length=285) Species:
562
(Escherichia coli) [
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MSTLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIV
EAEKRGRIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDERRAAMR
AYGAELIMEGARDLALEMANRGEGKLLDQFNNPDNPKAHYTTTGPEIWQQ
TGGRITHFVSSMGTTGTITGVSEFMREQSKPVTIVGLQPEEGSSIPGIRR
WPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVA
GALRVAKANPDAVVVAIICDRGDRYLSTGVFGEEH
Ligand information
Ligand ID
PLP
InChI
InChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKey
NGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0
Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04
O=P(O)(O)OCc1cnc(c(O)c1C=O)C
Formula
C8 H10 N O6 P
Name
PYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBL
CHEMBL82202
DrugBank
DB00114
ZINC
ZINC000001532514
PDB chain
2bht Chain D Residue 320 [
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Receptor-Ligand Complex Structure
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PDB
2bht
Structure of the O-Acetylserine Sulfhydrylase Isoenzyme Cysm from Escherichia Coli
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
V40 K41 G174 T175 T176 T178 G208 S255 C280
Binding residue
(residue number reindexed from 1)
V40 K41 G163 T164 T165 T167 G197 S244 C269
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
K41 S69 Q199 G203 S255 C280
Catalytic site (residue number reindexed from 1)
K41 S69 Q188 G192 S244 C269
Enzyme Commision number
2.5.1.47
: cysteine synthase.
Gene Ontology
Molecular Function
GO:0004124
cysteine synthase activity
GO:0005515
protein binding
GO:0016740
transferase activity
GO:0016765
transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016829
lyase activity
GO:0030170
pyridoxal phosphate binding
GO:0042803
protein homodimerization activity
GO:0080146
L-cysteine desulfhydrase activity
Biological Process
GO:0006535
cysteine biosynthetic process from serine
GO:0016226
iron-sulfur cluster assembly
GO:0019344
cysteine biosynthetic process
GO:0019345
cysteine biosynthetic process via S-sulfo-L-cysteine
GO:0019450
L-cysteine catabolic process to pyruvate
Cellular Component
GO:0005737
cytoplasm
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Cellular Component
External links
PDB
RCSB:2bht
,
PDBe:2bht
,
PDBj:2bht
PDBsum
2bht
PubMed
15952768
UniProt
P16703
|CYSM_ECOLI Cysteine synthase B (Gene Name=cysM)
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