Structure of PDB 1rkr Chain D Binding Site BS01

Receptor Information
>1rkr Chain D (length=129) Species: 85698 (Achromobacter xylosoxidans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AECSVDIAGNDGMQFDKKEITVSKSCKQFTVNLKHPGKLAKNVMGHNWVL
TKQADMQGAVNDGMAAGLDNNYVKKDDARVIAHTKVIGGGETDSVTFDVS
KLAAGEDYAYFCSFPGHFALMKGVLKLVD
Ligand information
Ligand IDCU
InChIInChI=1S/Cu/q+2
InChIKeyJPVYNHNXODAKFH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Cu+2]
CACTVS 3.341[Cu++]
FormulaCu
NameCOPPER (II) ION
ChEMBL
DrugBankDB14552
ZINC
PDB chain1rkr Chain D Residue 203 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1rkr Structure of azurin I from the denitrifying bacterium Alcaligenes xylosoxidans NCIMB 11015 at 2.45 A resolution.
Resolution2.45 Å
Binding residue
(original residue number in PDB)		H46 C112 H117
Binding residue
(residue number reindexed from 1)		H46 C112 H117
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005507 copper ion binding
GO:0009055 electron transfer activity
GO:0046872 metal ion binding
Cellular Component
GO:0042597 periplasmic space

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:1rkr, PDBe:1rkr, PDBj:1rkr
PDBsum1rkr
PubMed9761902
UniProtP56547|AZUR1_ALCXX Azurin-1

[Back to BioLiP]