Structure of PDB 1rjz Chain D Binding Site BS01
Receptor Information
>1rjz Chain D (length=278) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GPHSLRYFVTAVSRPGLGEPRFISVGYVDNTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVP
LGKEQYYTCHVYHQGLPEPLTLRWEPPP
Ligand information
>1rjz Chain Q (length=8) Species:
10304
(Human alphaherpesvirus 1 strain F) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
SEIEFARL
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1rjz
Structural Basis for the Restoration of TCR Recognition of an MHC Allelic Variant by Peptide Secondary Anchor Substitution
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
Y7 Y45 E63 K66 N70 V76 D77 Y84 T143 W147 E152 R155 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 Y45 E63 K66 N70 V76 D77 Y84 T143 W147 E152 R155 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:1rjz
,
PDBe:1rjz
,
PDBj:1rjz
PDBsum
1rjz
PubMed
15557346
UniProt
P01901
|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)
[
Back to BioLiP
]