Structure of PDB 1l3l Chain D Binding Site BS01

Receptor Information
>1l3l Chain D (length=225) Species: 358 (Agrobacterium tumefaciens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MQHWLDKLTDLAAIEGDECILKTGLADIADHFGFTGYAYLHIQHRHITAV
TNYHRQWQSTYFDKKFEALDPVVKRARSRKHIFTWSGEHERPTLSKDERA
FYDHASDFGIRSGITIPIKTANGFMSMFTMASDKPVIDLDREIDAVAAAA
TIGQIHARISFLAWLDPKEATYLRWIAVGKTMEEIADVEGVKYNSVRVKL
REAMKRFDVRSKAHLTALAIRRKLI
Ligand information
Receptor-Ligand Complex Structure
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PDB1l3l Structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA.
Resolution1.66 Å
Binding residue
(original residue number in PDB)		N203 R206 R210
Binding residue
(residue number reindexed from 1)		N194 R197 R201
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000976 transcription cis-regulatory region binding
GO:0001216 DNA-binding transcription activator activity
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0009372 quorum sensing
GO:0045893 positive regulation of DNA-templated transcription
Cellular Component
GO:0032993 protein-DNA complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1l3l, PDBe:1l3l, PDBj:1l3l
PDBsum1l3l
PubMed12087407
UniProtP33905|TRAR_RHIRD Transcriptional activator protein TraR (Gene Name=traR)

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