Structure of PDB 1g16 Chain D Binding Site BS01

Receptor Information
>1g16 Chain D (length=160) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IMKILLIGDSGVGKSCLLVRFVEDKFNPIDFKIKTVDINGKKVKLQIWDT
AGQERFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEA
QLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTL
AKLIQEKIDS
Ligand information
Ligand IDCO
InChIInChI=1S/Co/q+2
InChIKeyXLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Co+2]
CACTVS 3.341[Co++]
FormulaCo
NameCOBALT (II) ION
ChEMBL
DrugBankDB14205
ZINC
PDB chain1g16 Chain D Residue 307 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1g16 Crystal structures of a Rab protein in its inactive and active conformations.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		D43 D166
Binding residue
(residue number reindexed from 1)		D24 D140
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) Q79
Catalytic site (residue number reindexed from 1) Q53
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:1g16, PDBe:1g16, PDBj:1g16
PDBsum1g16
PubMed11099382
UniProtP07560|SEC4_YEAST Ras-related protein SEC4 (Gene Name=SEC4)

[Back to BioLiP]