Structure of PDB 1ffn Chain D Binding Site BS01
Receptor Information
>1ffn Chain D (length=273) Species:
10090
(Mus musculus) [
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PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRW
Ligand information
>1ffn Chain F (length=9) [
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KAVYNFATM
Receptor-Ligand Complex Structure
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PDB
1ffn
Peptidic termini play a significant role in TCR recognition
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
Y7 Y59 E63 K66 Q70 W73 S77 Y84 Q97 S99 F116 T143 K146 W147 H155 Y156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y6 Y58 E62 K65 Q69 W72 S76 Y83 Q96 S98 F115 T142 K145 W146 H154 Y155 Y158 W166 Y170
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:1ffn
,
PDBe:1ffn
,
PDBj:1ffn
PDBsum
1ffn
PubMed
12218131
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
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