Structure of PDB 1bp7 Chain D Binding Site BS01
Receptor Information
>1bp7 Chain D (length=152) Species:
3055
(Chlamydomonas reinhardtii) [
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NTKYNKEFLLYLAGFVDGDGSIIAQIKPNQSYKFKHQLSLTFQVTQKTQR
RWFLDKLVDEIGVGYVRDRGSVSDYILSEIKPLHNFLTQLQPFLKLKQKQ
ANLVLKIIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAV
LD
Ligand information
>1bp7 Chain 3 (length=24) [
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gcaaaacgtcgtgagacagtttcg
Receptor-Ligand Complex Structure
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PDB
1bp7
DNA recognition and cleavage by the LAGLIDADG homing endonuclease I-CreI.
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
D20 S22 Q26 K28 Q44 T46 Q47 K48 R70 N136 S138 R141 K142
Binding residue
(residue number reindexed from 1)
D19 S21 Q25 K27 Q43 T45 Q46 K47 R69 N135 S137 R140 K141
Enzymatic activity
Catalytic site (original residue number in PDB)
G19 D20
Catalytic site (residue number reindexed from 1)
G18 D19
Enzyme Commision number
3.1.-.-
Gene Ontology
Molecular Function
GO:0004519
endonuclease activity
GO:0042802
identical protein binding
GO:0046872
metal ion binding
Biological Process
GO:0006314
intron homing
Cellular Component
GO:0009507
chloroplast
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Cellular Component
External links
PDB
RCSB:1bp7
,
PDBe:1bp7
,
PDBj:1bp7
PDBsum
1bp7
PubMed
9809068
UniProt
P05725
|DNE1_CHLRE DNA endonuclease I-CreI
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