Structure of PDB 1bjq Chain D Binding Site BS01

Receptor Information
>1bjq Chain D (length=233) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ANIQSFSFKNFNSPSFILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFY
SSPIQIYDKSTGAVASWATSFTVKISAPASFADGIAFALVPVGSEPRRNG
GYLGVFDSDVYNNSAQTVAVEFDTLSNSGWDPSMKHIGIDVNSIKSIATV
SWDLANGENAEILITYNAATSLLVASLVHPSRRTSYILSERVDITNELPE
YVSVGFSATTGLSEGYIETHDVLSWSFASKLPD
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain1bjq Chain D Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1bjq Carbohydrate binding, quaternary structure and a novel hydrophobic binding site in two legume lectin oligomers from Dolichos biflorus.
Resolution2.65 Å
Binding residue
(original residue number in PDB)
D125 L127 N129 D133
Binding residue
(residue number reindexed from 1)
D123 L125 N127 D131
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:1bjq, PDBe:1bjq, PDBj:1bjq
PDBsum1bjq
PubMed10047489
UniProtP05045|LEC1_VIGUC Seed lectin subunit I

[Back to BioLiP]