Structure of PDB 6hiy Chain Cn Binding Site BS01

Receptor Information
>6hiy Chain Cn (length=110) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RWAAKFYGQVTFGPRNYPYPSSRWLARRFQMKKHRIIKRFRFRRYKLAAV
ANLPFAKMIRVGMLPELKSSKTKRGDVVDPTLSGQLVSAVKNTGEKRKGQ
RTRPKSKYQV
Ligand information
>6hiy Chain CA (length=478) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
uauuuauaaaaauauauuuuuuuuuuuu
....................<<<.......<<<<..............<.
..>..........................................<<...
.<<...<<<.......>>>..>>.......>>........<<....>>..
..................................................
.................<<<.(...<<<<<.....<<..).>>.......
>>>>>>>>.......>>>>............<..................
.<.......>.....................>............<<<...
.>>>................<......>..>>>..<<.............
.>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
<<<<<....>>>>>>>>>..........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6hiy Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Resolution3.27 Å
Binding residue
(original residue number in PDB)
R141 K145 F146 F152 P154 R155 N156 Y157 P158 Y159 S161 S162 R163 W164 A166 R167 Q170 K172 K173 H174 R175 K178 R181 R183 Y185 R200 G202 M203 S210 K213 K238 G239 Q240 R241 T242 R243 S246 K247 Y248
Binding residue
(residue number reindexed from 1)
R1 K5 F6 F12 P14 R15 N16 Y17 P18 Y19 S21 S22 R23 W24 A26 R27 Q30 K32 K33 H34 R35 K38 R41 R43 Y45 R60 G62 M63 S70 K73 K98 G99 Q100 R101 T102 R103 S106 K107 Y108
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0020023 kinetoplast

View graph for
Cellular Component
External links
PDB RCSB:6hiy, PDBe:6hiy, PDBj:6hiy
PDBsum6hiy
PubMed30213880
UniProtQ57VQ9

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