Structure of PDB 6hiy Chain Cj Binding Site BS01

Receptor Information
>6hiy Chain Cj (length=226) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RADPLNGGSSMTLGSKGSKLSPEPHRRRMPWTAAKEYVPGVVLNARDKMV
LDGVQLLDIESIDRASQLDPLEVLRAVVATREYNISTGKNIFQLASQATY
NGRGQRFYRKEWQEGTYDKYVTLSAIDFDRDGNKGTAYGYITFHGETTTR
PVQVDFADVPGWYMDFVEERAVPFTGIVPPPPSIGTDVPVDPHSYRLKAY
PYYDAPNPPEFVERLLKDRGVLPDTP
Ligand information
>6hiy Chain CA (length=478) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
uauuuauaaaaauauauuuuuuuuuuuu
....................<<<.......<<<<..............<.
..>..........................................<<...
.<<...<<<.......>>>..>>.......>>........<<....>>..
..................................................
.................<<<.(...<<<<<.....<<..).>>.......
>>>>>>>>.......>>>>............<..................
.<.......>.....................>............<<<...
.>>>................<......>..>>>..<<.............
.>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
<<<<<....>>>>>>>>>..........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6hiy Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Resolution3.27 Å
Binding residue
(original residue number in PDB)		R10 A11 P13 S19 G23 K25 G26 S27 L29 H34 R35 R37 W40 Y46 G49 V50
Binding residue
(residue number reindexed from 1)		R1 A2 P4 S10 G14 K16 G17 S18 L20 H25 R26 R28 W31 Y37 G40 V41
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit

View graph for
Cellular Component
External links
PDB RCSB:6hiy, PDBe:6hiy, PDBj:6hiy
PDBsum6hiy
PubMed30213880
UniProtQ57UK0

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