Structure of PDB 9cai Chain Ch Binding Site BS01

Receptor Information
>9cai Chain Ch (length=122) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVR
KNIARLLTVINQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELS
LRSAKQQAKSRNQAVRKFAVKA
Ligand information
>9cai Chain A8 (length=146) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uagcuucagcgauggaucgguugcaucgaguaucgaugaagaacgcagcu
ugcugcguuacuuaccacgaauugcagagaguggugaaauuucgaacgca
uagcaccaacugggccuccaguugguacgucugguucaggguuguu
........................................<<<<<<.((.
....>>>.....<<<<<<.....)).....>>>>>.>...>>>....<<.
..>><<<<<<<<<....>>>>>>>>>....................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9cai High-Resolution Reconstruction of a C. elegans Ribosome Sheds Light on Evolutionary Dynamics and Tissue Specificity.
Resolution2.59 Å
Binding residue
(original residue number in PDB)		K5 C6 K7 R10 K35 L44 S45 R48 R51 K52 A55 R56 L58 T59 N62 Q63 K66 R70 I81 R84 K86 T88 R89 R92
Binding residue
(residue number reindexed from 1)		K4 C5 K6 R9 K34 L43 S44 R47 R50 K51 A54 R55 L57 T58 N61 Q62 K65 R69 I80 R83 K85 T87 R88 R91
External links
PDB RCSB:9cai, PDBe:9cai, PDBj:9cai
PDBsum9cai
PubMed39209556
UniProtP34662|RL35_CAEEL Large ribosomal subunit protein uL29 (Gene Name=rpl-35)

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