Structure of PDB 6xu6 Chain CV Binding Site BS01 |
|
|
| >6xu6 Chain A5 (length=3707)
[Search RNA sequence]
[Download ligand structure]
[Download structure with residue number starting from 1]
[View ligand structure]
|
uuauauacaaccucaacucauaugggacuacccccugaauuuaagcauau
uaauuaggggaggaaaagaaacuaacaaggauuuucuuaguagcggcgag
cgaaaagaaaacaguucagcacuaagucacuuugucuauauggcaaaugu
gagaugcaguguauggagcgucaauauucuaguaugagaaauuaacgauu
uaaguccuucuuaaaugaggccauuuacccauagagggugccaggcccgu
auaacguuaaugauuacuagaugauguuuccaaagagucguguugcuuga
uagugcagcacuaagugggugguaaacuccaucuaaaacuaaauauaacc
augagaccgauaguaaacaaguaccgugagggaaaguugaaaagaacucu
gaauagagaguuaaacaguacgugaaacugcuuagagguuaagcccgaug
aaccugaauauccguuauggaaaauucaucauuaaaauuguaauauuuaa
auaauauuaugagaauagugugcauuuuuuccauauaaggacauuguaau
cuauuagcauauaccaaauuuaucauaaaauauaacuuauaguuuauucc
aauuaaauugcuugcauuuuaacacagaauaaauguuauuaauuugauaa
agugcugauagauuuauaugauuacagugcguuaauuuuucggaauuaua
uaauggcauaauuaucauugauuuuuguguuuauuauaugcacuuguaug
auuaacaaugcgaaagauucaggauaccuucgggacccgucuugaaacac
ggaccaaggagucuaacauaugugcaaguuauugggauauaaaccuaaua
gcguaauuaacuugacuaauaaugggauuaguuuuuuagcuauuuauagc
uaauuaacacaaucccggggcguucuauauaguuauguauaauguauauu
uauauuauuuaugccucuaacuggaacguaccuugagcauauaugcugug
acccgaaagauggugaacuauacuugaucagguugaagucaggggaaacc
cugauggaagaccgaaacaguucugacgugcaaaucgauugucagaauug
aguauaggggcgaaagaccaaucgaaccaucuaguagcugguuccuuccg
aaguuucccucaggauagcuggugcauuuuaauauuauauaaaauaaucu
uaucugguaaagcgaaugauuagaggccuuagggucgaaacgaucuuaac
cuauucucaaacuuuaaauggguaagaaccuuaacuuucuugauaugaag
aucaagguuaugauauaaaugucccagugggccacuuuugguaagcagaa
cuggcgcugugggaugaaccaaacguaauguuacgugcccaaauuaacaa
cucaugcagauaccaugaaaggcguugguugcuuaaaacagcaggacggu
gaucauggaagucgaaauccgcuaaggaguguguaacaacucaccugccg
aagcaacuagcccuuaaaauggauggcgcuuaaguuguauaccuauacau
uaccgcuaaaguagaugauuuauauuacuugugauauaaauuuugaaacu
uuagugaguaggaagguacaaugguaugcguagaaguguuuggcguaagc
cugcauggagcugccauugguacagaucuugguggauaguagcaaauaau
cgaaugagagccuuggaggacugaaguggagaaggguuucgugugaacag
ugguugaucacgaguuagucgguccuaaguucaaggcgaaagcgaaaauu
uucaaguaaaacauaauuuugaacgaaagggaauacgguuccaauuccgu
aaccuguugaguauccguuuguuauuaaauaugggccucgugcucauccu
ggcaacaggaacgaccauaaagaagccgucgagagauaucggaagaguuu
ucuuuucuguuuuauagccguacuaccauggaagucuuucgcagagagau
augguagaugggcuagaagagcaugacauauacuguugugucgauauuuu
cuccucggaccuugaaaauuuaugguggggacacgcaaacuucucaacag
gccguaccaauauccgcagcuggucuccaaggugaagagucucuagucga
uagaauaauguagguaagggaagucggcaaauuagauccguaacuucggg
auaaggauuggcucugaagauugagauagucggccuugauugggaaacug
gaacuuucuugcuaaauuauaacgauuaucaauuaacaaucaauucagaa
cuggcacggacuuggggaauccgacugucuaauuaaaacaaagcauugug
auggcccuagcggguguugacacaaugugauuucugcccagugcucugaa
ugucaaagugaagaaauucaaguaagcgcgggucaacggcgggaguaacu
augacucucuuaagguagccaaaugccucgucaucuaauuagugacgcgc
augaauggauuaacgagauuccuacugucccuaucuacuaucuagcgaaa
ccacagccaagggaacgggcuuggaauaauuagcggggaaagaagacccu
uuugagcuugacucuaaucuggcaguguaaggagacauaagagguguaga
auaagugggagauauuagaccucgguuugguaucgucaaugaaauaccac
uacucuuauuguuuccuuacuuacuugauuaaauggaacguguaucauuu
ccuagauuggguuuugaugcaagcuucuugaucaaaguaucacgaguuug
uuauauaaucgcaaacaaauuugguauaacuccaauuacucagguaugau
ccaauucaaggacauugccagguagggaguuugacuggggcgguacaucu
cucaaauaauaacggaggugucccaaggccagcucagugcggacagaaac
cacacauagagcaaaagggcaaaugcugacuugaucucgguguucaguac
acacagggacagcaaaagcucggccuaucgauccuuuugguuuaaagagu
uuuuaacaagaggugucagaaaaguuaccauagggauaacuggcuugugg
cggccaagcguucauagcgacgucgcuuuuugauccuucgaugucggcuc
uuccuaucauugugaagcaaaauucaccaagcguuggauuguucacccau
gcaagggaacgugagcuggguuuagaccgucgugagacagguuaguuuua
cccuacuaaugacaaaacguuguugcgacagcauuccugcguaguacgag
aggaacccgcagguacggaccaauggcacaauacuuguucgagcgaacag
ugguaugacgcuacguccguuggauuaugccugaacgccucuaaggucgu
auccgugcuggacugcaaugauaaauaaggggcaauuugcauuguauggc
uucuaaaccauuuaaaguuuauaauuuacuuuauaaacgacaauggaugu
gaugccaauguaauuuguaacauaguaaauugggaggaucuucgaucacc
ugaugccgcgcuaguuacauauaaaagcauuauuuaauacaaugacaaag
ccuagaaucaauuguaaacgacuuuuguaacaggcaagguguuguaagug
guugagcagcugccauacugcgauccacugaagcuuauccuuugcuugau
gauucga |
..............................<<<........<......>.
........>>.>.........<<....>>..<<<<<<.....<<.....>
>....>>>>>>..<<<..........<<<<<<<<<<.....>>>>>>.>>
>>...............<.........<<<<<<<......<<<<<<<...
.....<<<<.......>>>>.......((......<<<.....))>>>..
....>>>>>>>...>>>>>>>.......>..........<<<<<<<....
....>>>>>>>.....<<<<<..((((((>>>>>..>>>...........
.......................<<....>>...............<<<<
....>>>>...................................<<<<<.<
..<<<<<........<<.<<<<<<......<<<<...<<<<<<<<<....
...>>>>>>>>.>..>>>>.......>>>>>>.>>......<<<<<<..<
<<<<<<<..<.<<.<<<....<<..<....<<<.......<<..<.....
.............>..>>..........>>>...>..>>....>>>.>>.
>...>>>>>>>>..............<.........<.....>.......
<.<<<<<<<<<..<<<...>>>.>.>>>>>.>>>.>.......>......
....>>>>>>........>>>>>....>.>>>>>..<<<<........>>
>><<<<<<.....<<.<<<<<<<<<..<<<...<<<.......>>>...>
>>...<......>..........<<<<<<.<<<..<<<............
>>>..>>>..>>>>>><<<<<<<<<<....<<<<<..<............
............>....>>>>>>>>>>>>.>>>...>>>>>>>>>.>>..
.<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<<<<<....>>
>>>>>.....>>>...<<<..<<.<<........>>>>.>>>....>>>>
>>>>>...<<.......>>......>>>>>>...>..>.>>..<<<<<<.
...<.<<<....>>>.><<..<<<..<<................<<.<.<
<<<<<....<<<....<<<....<<<.....<.<<.......>>.>...>
>>....>>>..>.>>....>>>>>>...<.<.<.<<<..........>>>
.>.>.>.....>.>>.>>.>>>....>>..<<<<.<<<<<.....>>>>>
.>>>>....<<<......>>>...<<<<<<<.<.<<(((.......<<<<
<.......<..........<<<.<<<<<<<<<.........<<<..<<..
...................>>.......................>>>...
..>>>>>>>>>>>>..........))).>....>>>>>..>>.>..>>>>
>>><<<<<<<<<....<<<<<<<<<<......>>>>>>>>>>.....>>>
>>>>>>....>>>>>>..<<<<<<<..<<......<<<<..<<<....>>
>.>>>>...>>.>>>>>>>........>>>>>><<......<<......<
<.<<........>>.>>.<<<<.....<<<<<.<<...<<<<<....<<.
....>>..>>>>>....((<<<<<<...<<<....<<....>>.......
.....................>>>....>>...<<<<<........>>>>
>))<<<<<<<<.......<<......>>....<<........>>....<<
<....>>>......<<<<<<<....<<<..<<<<.<..<..<.<<<<...
[[..>>>>.><...<<<<<...<<<<<<<<....<<<.....>>>....>
>>>>>>>...>>>>>.....><<<<<<<.....>>>>>>>..>...>..>
>>>..>>>..........>>>>>>>.................>>>>>>>>
>>>>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..
<<<<.....<<<<<<<.<<.........<.....<<<<<...........
....>>>>><<.<<<<<<<<<<....<.<.<...................
......(................>)>.>.........>>>>..>>>>>>.
>>............<<<<<<<<<..<<<.........>>>..<<<<<<<.
...<<<<....>>>>......>>>>>>>...<<..<<<..<<<<<<....
.<<.....<<<<....>>>>.....>>..>>>>..>>>>><<<<<<....
...>>>>>>........<...........<<<<<.......>>>>>....
.>.....>>....>>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....
>>....<<<<<........>>>>>....<<<<<..<<<.<<......<<<
..<<<<<<..<<<<<.<<<<<<<<<.<<<<<<<.................
......<<....<<<<<<<<....>>>>>>>>..............>>..
............>.>>>>>>...<<<<<.....<<<<...<<<<<.....
................>>>>>...............<<<<...<<.....
.................<..>..................>>..>>>>..>
>>>..>>>>>....>>>>>>>>>..>>>>>...<<<.....>>>..<<<<
<<...........>>>>>>..<<...<<.<<<<...<<<.<<.......>
>.>>>.....<<...(((>>....>>>>.>>...<<<<.<<<<.......
>>>>.>>>>.<<<....>>>.>>)))......<<<<<<<..<<<<.))))
))>>>>>>>>>>>.........>>>>..>>.>>>.......<<.<...<<
<<<<...<<.......>>...>>>>>>....>.>.>.......<<<<<.<
.<<<<..<.<.<<<<<......>>>>>...>.>.<<<.........>>>.
....>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>.
.>>>.>>>>>........<<<<<<<<..<<<<.<.<<<<<<.........
.......>>>>>>.><<<<<....<<<...<<<<<<<<..]]....>>>.
.>>>>>...>>>..>>>>>.<<<.....<<<<...........>>>>...
..>>>.>>>>....>>>>>>>>.......<<<<....<<<<<<<<<....
................<<<<<<<<......>>>>>>>>............
...............<<<<<<....<..<<<<<<..............>>
>>>>.....>...>>>>>>..................>>>>>>>.>>..>
>>>.<<<<<.<.............>.....<<<<<<<<<.<<<....<<<
<....<.<<........>>.>...>>>>...>>>....>>>>.>>>>>..
>>>>>.. |
|
|
|
| Enzyme Commision number |
? |
|
|
|
|
|
