Structure of PDB 4v7e Chain CV Binding Site BS01

Receptor Information
>4v7e Chain CV (length=140) Species: 4565 (Triticum aestivum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLN
RLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFED
NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV
Ligand information
>4v7e Chain Ad (length=1762) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccugguugauccugccaguagucauaugcuugucucaaagauuaagcc
augcaugugcaaguaugaaccaauuugaacugugaaacugcgaauggcuc
auuaaaucaguuauaguuuguuugaugguacgugcuacucggauaaccgu
aguaauucuagagcuaauacgugcaacaaaccccgacuucugggaggggc
gcauuuauuagauaaaaggcugacgcgggcucugcucgcugauccgauga
uucaugauaacucgacggaucgcacggccuucgugccggcgacgcaucau
ucaaauuucugcccuaucaacuuucgaugguaggauaggggccuaccaug
guggugacgggugacggagaauuaggguucgauuccggagagggagccug
agaaacggcuaccacauccaaggaaggcagcaggcgcgcaaauuacccaa
uccugacacggggagguagugacaauaaauaacaauaccgggcgcauuag
ugucugguaauuggaaugaguacaaucuaaaucccuuaacgaggauccau
uggagggcaagucuggugccagcagccgcgguaauuccagcuccaauagc
guauauuuaaguuguugcaguuaaaaagcucguaguuggaccuugggccg
gccggcaucgcgcuccuagccuuaauuggccgggucguguuuccggcauc
guuacuuugaagaaauuagagugcucaaagcaagccaucgcucuggauac
auuagcaugggauaacaucauaggauuccgguccuauuguguuggccuuc
gggaucggaguaaugauuaauagggacagucgggggcauucguauuucau
agucagaggugaaauucuuggauuuaugaaagacgaacaacugcgaaagc
auuugccaaggauguuuucauuaaucaagaacgaaaguugggggcucgaa
gacgaucagauaccguccuagucucaaccauaaacgaugccgaccaggga
ucggcggauguugcuuauaggacuccgccggcaccuuaugagaaaucaaa
gucuuuggguuccggggggaguauggucgcaaggcugaaacuuaaaggaa
uugacggaagggcaccaccaggcguggagccugcgcuuaauuugacucaa
cacggggaaacuuaccagguccagacauagcaaggauugacagacugaga
gcucuuucuugauucuaugggugguggugcauggccguucuuaguuggug
gagcgauuugucugguuaauuccguuaacgaacgagaccucagccugcua
acuagcuaugcggagccaucccuccgcagcuagcuucuuagagggacuau
ggccguuuaggccacggaaguuugaggcaauaacaggucugucaugcccu
uagauguucugggccgcacgcgcgcuacacugauguauucaacgaguaua
uagccuuggccgacaggcccggguaaucuugggaaauuucaucgugaugg
ggauagaucauugcaauuguuggucuucaacgaggaaugccuaguaagcg
cgagucaucagcucgcguugacuacgucccugcccuuuguacacaccgcc
cgucgcuccuaccgauugaaugguccggugaaguguucggaucgcggcga
cgggggcgguucgccgcccccgacgucgcgagaaguccauugaaccuuau
cauuuagaggaagcagaagucguaacaagguuuccguaggugaaccugcg
gaaggaucauug
...<<<<....[[[[.>>>>.<<<.<<<<<<...<.<<..<......<<<
.<<<..<<...<<.....<<...........>>....>>>>......<<.
.......<<<..<<..<<....<<<<<............<<.....<..<
<<.....>>>..>......>>..........<<<............>>>.
<...<..<<<.....[[[.(((((<<<.........>>>...........
....>>>.>......>........<<<<......>>>.>.....>>>>>.
..>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>
>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<...
.......>>>.>>...<<....>>.....>>>>>>.........<<<...
.<<<.....>>>..>>>..>>...>.>.....<<.<<.<<..........
....>>.>>..>>......<<.................>>.........<
<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>
>>>>>>>..........<.<{{.....<.<<...<<<.<.....<.<<<<
..>>>>.>...<..............<<<.....>>>............>
<<<<<<.<<.......<<...<.......>...<.......>.....>>.
.....>>.>>..>>>>.........<<<<<<<<<<.....))))).]]].
>>>>>>>>>>.......>....<<<<<<.<<...<<<<..<<..<<<<<<
<<...<<<......>>>......>>>>>>>>..>>.......<<....>>
...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...
<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..
<<<<<<<<.<<<........>>>>>>>>>>>..>>>...<<..}}>>...
>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..]]]].
.<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<.......<<......
..>>..........<<<<<.<....<<<<<........<<.<<<......
..>>>.>>......>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<
<<....>>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<
<..<<......<<<<......>>>>........>>..>>>>.>>.....<
<<<<.....>>>>>........>>>>>....>>>.>>>.....>>>>>>>
.....>.>>>>>......>>>>.>>>.....<<<<.<.......<<....
...<<<.<<<<....>>>>.>>>....>>........>.>>>>.......
....<<<<<<..........>>>>>>..........>>>>>>....<<<<
<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..
<<.<..<.<<.<<....<<<<<<<..<<<..<<<<..<...<<...<<<.
<<<<<<<<<....>>>>>>>>>.>>>...>>...>..>>>>..>>>..>>
>>>>>...>>.>>.>...>.>>...>.....<<<<<<<<<....>>>>>>
>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4v7e Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion.
Resolution5.5 Å
Binding residue
(original residue number in PDB)		K67 G68
Binding residue
(residue number reindexed from 1)		K67 G68
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4v7e, PDBe:4v7e, PDBj:4v7e
PDBsum4v7e
PubMed24499919
UniProtQ5I7K4

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