Structure of PDB 7pua Chain CP Binding Site BS01

Receptor Information
>7pua Chain CP (length=180) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARAVIKRRSPQLWGAPGAPIIRMRGHHVVWKFQSYDLVVEHTHKRRNSDI
RLLHYLGKHCPHPQKSLWSPDTPVAQDRHLFMLTTVDIDAFKYWFGVKRC
RLSMKPWALLAKAGLLPPSLTQNSKIMPKPLFDKESLMRYYLANRKDEDV
MAREKYLNYENSMVKTEEERAAERPVAPYL
Ligand information
>7pua Chain CA (length=501) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
uuagauggguguggaaaaauaaaaaaaauaauuaaauaaauuaaauuagu
cagaaauggaugccagccguugcgguaauuucuaugcuuuuaaauauuau
acaaaauuguuaagugcugauuuaaccaauaaaaauauaaauaauuuuac
cauuagguauuuuauucauauaauuaauaggauaauauuuguaguuuuug
auaccaugauaaggauuauaaauugaaaguguuaauaucauaaucaaaau
uuauuauuuauauuaaauauguauguguagauaaaauaagacccaccaau
uuuuauaauaaaaauaacgugcaguaauuaauauauuuauaaaaauauau
u
..............................<<<<<....<........<.
..>..........................................<....
.<<...<<<.......>>>..>>........>........<<....>>..
.......................................>.......<<<
.....<<<<<.....<<....>>.......>>>>>>>>.....>.>>>>.
.....<<<<<<<<<<....>>>>>>.>>>>..................<<
<....>>>..<<<<<...................................
......<.<<<<...................>>.>>>.............
..............................>>>>>........<<<..<<
<<<<.....>>>>>>...>>>........<<<<<<<<<....>>>>>>>>
>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7pua Mitoribosomal small subunit maturation involves formation of initiation-like complexes.
Resolution3.6 Å
Binding residue
(original residue number in PDB)		A9 R10 A11 V12 I13 R15 R16 P18 Q19 L20 W21 G22 A23 P24 G25 A26 W38 R53 N55 R107 R109 L128 K137
Binding residue
(residue number reindexed from 1)		A1 R2 A3 V4 I5 R7 R8 P10 Q11 L12 W13 G14 A15 P16 G17 A18 W30 R45 N47 R99 R101 L120 K129
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit

View graph for
Cellular Component
External links
PDB RCSB:7pua, PDBe:7pua, PDBj:7pua
PDBsum7pua
PubMed35042777
UniProtQ384N9

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