Structure of PDB 9cai Chain CN Binding Site BS01

Receptor Information
>9cai Chain CN (length=203) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRL
GYRAKQGFVVYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAV
AEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQWI
TKPVHKHREQRGLTSAGRKSRGLGKGWRFSATRGGSQAKNWKRKNTKVFH
RKR
Ligand information
>9cai Chain A8 (length=146) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uagcuucagcgauggaucgguugcaucgaguaucgaugaagaacgcagcu
ugcugcguuacuuaccacgaauugcagagaguggugaaauuucgaacgca
uagcaccaacugggccuccaguugguacgucugguucaggguuguu
........................................<<<<<<.((.
....>>>.....<<<<<<.....)).....>>>>>.>...>>>....<<.
..>><<<<<<<<<....>>>>>>>>>....................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB9cai High-Resolution Reconstruction of a C. elegans Ribosome Sheds Light on Evolutionary Dynamics and Tissue Specificity.
Resolution2.59 Å
Binding residue
(original residue number in PDB)		R38 Q57 Y62 L110 D136 H139
Binding residue
(residue number reindexed from 1)		R37 Q56 Y61 L109 D135 H138
External links
PDB RCSB:9cai, PDBe:9cai, PDBj:9cai
PDBsum9cai
PubMed39209556
UniProtP91374|RL15_CAEEL Large ribosomal subunit protein eL15 (Gene Name=rpl-15)

[Back to BioLiP]