Structure of PDB 8i9v Chain CM Binding Site BS01

Receptor Information
>8i9v Chain CM (length=187) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QVIFKRAEKYVKEYREQEREKIRLARIAKQQGSFHIPAEAKLVFVIRIKG
INKIPPKPRKILQLLRLRQINNGVFVKVTKATAEMIKIVEPWVAYGYPNL
KSVRELIYKRGYGKVNGQRIPLTDNAIIEENLGKYGIICIEDLIHEIFTV
GPNFKQAANFLWPFKLSNPNGGGNREEHINALIRAMN
Ligand information
>8i9v Chain C3 (length=98) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
caaccaucaagcccugggcuuguguuggggacccgcggcugcucgcgggc
ccugaaaagcaguggcgggcucgcuggcgggugccagccguaaaaccc
.......<<<<<<...>>>>>>....<<<<.<<<<<<<....>>>>>>>>
>>>.........<<<<<<<<<<<<..>>>>>>.>>.>>>>........
Receptor-Ligand Complex Structure
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PDB8i9v Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		E55 K59 R66 R73
Binding residue
(residue number reindexed from 1)		E8 K12 R19 R26
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8i9v, PDBe:8i9v, PDBj:8i9v
PDBsum8i9v
PubMed37129998
UniProtG0SFL0

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