Structure of PDB 6rxy Chain CG Binding Site BS01

Receptor Information
>6rxy Chain CG (length=378) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KVYRRLASELAFDKATYTQFRWNSGTVTSVAVCPPYAYTTTKDGYLTKWK
LQDLPKKRPERICFAKADARKANDKTYQGHLKAPLVVKASQDGKFVVTGG
ADKRLVVYNAADLKPIKAFTQHRDAVTGLAFRRGTNQLYSCSKDRTVKVW
SLDELAYVETLFGHQDEILDIDALGQERCVSVGARDRTARYWKVPEESQL
VFRGGGEGMDPASAAHEGSMDRVAMIDDDMFVTGSDNGDLALWSIQRKKP
LHVIARAHGLEPPIKLEDYSADEIPDPSIIPAPQPRGITALRTLPYSDLI
FSGSWDGCIRVWRLSEDKRKLEAVGILGVLVRGIVNDIALFERGGLCVVV
VTGKEMRFGRWKYMKEGRCGAVIFEVPK
Ligand information
>6rxy Chain C2 (length=230) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agcgacaauacuucagagaaucauuucuauaguaguuguccucucuugug
uuuccuaaaggagccacagaucccacccggguugaugaacgagauccucg
gcgccagugagguccauuuacucucgcucuaccugcaaagguggcggucg
cgugccucgucucgcggcuguauagagaguggcgaugaucuguaccccgc
ggggugggugucgauggaagucugaccggc
..................................................
..........................<<<<..............<<<<<<
<<<<.<<............<<<<<<...<<<<<......>>>>><<<<<<
<<.<......>.>>>>>>>>....>>>>>>.........>>.<<<<<<..
>>>>>>.>>>>>>>.>>>.......>>>>.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6rxy Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
Resolution4.7 Å
Binding residue
(original residue number in PDB)		T164 R167 N169 Y191 K221 K222 R223 R226 F229 K231 R235 R590 Y593 K595 R598
Binding residue
(residue number reindexed from 1)		T18 R21 N23 Y45 K56 K57 R58 R61 F64 K66 R70 R360 Y363 K365 R368
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030515 snoRNA binding
GO:0034511 U3 snoRNA binding
Cellular Component
GO:0005634 nucleus
GO:0032040 small-subunit processome

View graph for
Molecular Function
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Cellular Component
External links
PDB RCSB:6rxy, PDBe:6rxy, PDBj:6rxy
PDBsum6rxy
PubMed31378463
UniProtG0SG51

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