Structure of PDB 6rxx Chain CG Binding Site BS01

Receptor Information
>6rxx Chain CG (length=416) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TAAEKRLRLAQRYLEKTRKDEYAFDAEEIDRDLLAERLKVYRRLASELAF
DKATYTQFRWNSGTVTSVAVCPPYAYTTTKDGYLTKWKLQDLPKKRPERI
CFAKADARKANDKTYQGHLKAPLVVKASQDGKFVVTGGADKRLVVYNAAD
LKPIKAFTQHRDAVTGLAFRRGTNQLYSCSKDRTVKVWSLDELAYVETLF
GHQDEILDIDALGQERCVSVGARDRTARYWKVPEESQLVFRGGGEGMDPA
SAAHEGSMDRVAMIDDDMFVTGSDNGDLALWSIQRKKPLHVIARAHGLEP
PIKLEDYSADEIPDPSIIPAPQPRGITALRTLPYSDLIFSGSWDGCIRVW
RLSEDKRKLEAVGILGVLVRGIVNDIALFERGGLCVVVVTGKEMRFGRWK
YMKEGRCGAVIFEVPK
Ligand information
>6rxx Chain C2 (length=229) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agcgacaauacuucagagaaucauuucuauaguaguuguccucucuugug
uuuccuaaaggagccacagaucccacccggguugaugaacgagauccucg
gcgccagugagguccuuuacucucgcucuaccugcaaagguggcggucgc
gugccucgucucgcggcuguauagagaguggcgaugaucuguaccccgcg
gggugggugucgauggaagucugaccggc
..................................................
..........................<<<<......<.......<<<<<<
<<<<.<<...........<<<<<<...<<<<<<....>>>>>><<<<<<<
<.<......>.>>>>>>>>....>>>>>>.........>>.<<<<<<..>
>>>>>.>>>>>>>.>>>...>...>>>>.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6rxx Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
Resolution7.1 Å
Binding residue
(original residue number in PDB)		K221 K222 R223 F229
Binding residue
(residue number reindexed from 1)		K94 K95 R96 F102
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030515 snoRNA binding
GO:0034511 U3 snoRNA binding
Cellular Component
GO:0005634 nucleus
GO:0032040 small-subunit processome

View graph for
Molecular Function
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Cellular Component
External links
PDB RCSB:6rxx, PDBe:6rxx, PDBj:6rxx
PDBsum6rxx
PubMed31378463
UniProtG0SG51

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