Structure of PDB 8yfr Chain C Binding Site BS01

Receptor Information

>8yfr Chain C (length=263) Species: 460519 (Komagataella phaffii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

EPKVNIINAQDDEVELMLSDVNLSLANSLRRTMLAEVPTLAIDLVEIKMN
TSVLADEFISHRLGLIPLVSEDVEEMKYSRDCTCEDYCDECSVVLELSAR
HEGEEGTTDVYSSSLIKVSGPGNLNVGEPVRRDDYDQGILLCKLRNHQEL
NIRCIAKKGIAKEHAKWSPCSAIAFEYDPHNKLKHTDFWFEVDAKKEWPD
SKYATWEEPPKPGEVFDYKAKPNRFYMTVETTGSLKANQVFSRGIKTLQE
KLANVLFELENSR

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

8yfr Chain C Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8yfr Structural basis of eukaryotic transcription termination by the Rat1 exonuclease complex.
Resolution	3.4 Å
Binding residue (original residue number in PDB)	C85 C87 C91 C94
Binding residue (residue number reindexed from 1)	C82 C84 C88 C91
Annotation score	4

External links

PDB	RCSB:8yfr, PDBe:8yfr, PDBj:8yfr
PDBsum	8yfr
PubMed	39245712
UniProt	C4R7L2

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