Structure of PDB 8xud Chain C Binding Site BS01

Receptor Information

>8xud Chain C (length=647) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

DITRADQIPVLKEETQHATVSERVTSRFTRSHYRQFDLDQAFSAKIFDRY
LNLLDYSHNVLLASDVEQFAKKKTELGDELRSGKLDVFYDLYNLAQKRRF
ERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVKFDE
LSLKLTGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDP
HTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSK
AISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGK
GTKTRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVK
VQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDNNG
KVREDSDTDGQVFYKGPLVVLVDRFSAAASEIFAAAMQDYGRALVVGEPT
FGAGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGV
TPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTAFEPELLKE
HNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRL
ARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEK

Ligand information

>8xud Chain M (length=8) Species: 83333 (Escherichia coli K-12) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

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Receptor-Ligand Complex Structure

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Structure summary

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PDB	8xud Crystal structure of lipoprotein NlpI in complex with MepS
Resolution	3.49 Å
Binding residue (original residue number in PDB)	G397 L400 Q481 Q482 Y483 R484
Binding residue (residue number reindexed from 1)	G373 L376 Q457 Q458 Y459 R460

Enzymatic activity

Enzyme Commision number

3.4.21.102: C-terminal processing peptidase.

External links

PDB	RCSB:8xud, PDBe:8xud, PDBj:8xud
PDBsum	8xud
PubMed
UniProt	P23865\|PRC_ECOLI Tail-specific protease (Gene Name=prc)

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