Structure of PDB 8wem Chain C Binding Site BS01

Receptor Information
>8wem Chain C (length=347) Species: 817 (Bacteroides fragilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VTASIDLQSVSYTDLATQLNDVSDFGKMIILKDNGFNRQVHVSMDKRTKI
QLDNENVRLFNGRDKDSTSFILGDEFAVLRFYRNGESISYIAYKEAQMMN
EIAEFYAAPFKKTRAINEKEAFECIYDSGKDIVSVKINIDKAKKILNLPE
CDYINDYIKTPAVPSEPKTVYVICLRENGSTIYPNEVSAQMQDAANSVYA
VHGLKRYVNFHFVLYTTEYSCPSGDAKEGLEGFTASLKSNPKAEGYDDQI
YFLIRWGTWDNKILGMSWFNSYNVNTASDFEASGMSTTQLMYPGVMAHEL
GHILGAEHTDNSKDLMYATFTGYLSHLSEKNMDIIAKNLGWEAADGD
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8wem Chain C Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8wem Bacteroides fragilis toxin 1
Resolution1.8 Å
Binding residue
(original residue number in PDB)
D194 H348 H352 H358
Binding residue
(residue number reindexed from 1)
D156 H298 H302 H308
Annotation score4
External links
PDB RCSB:8wem, PDBe:8wem, PDBj:8wem
PDBsum8wem
PubMed
UniProtP54355|ENTM_BACFG Fragilysin (Gene Name=btfP)

[Back to BioLiP]