Structure of PDB 8vfy Chain C Binding Site BS01

Receptor Information
>8vfy Chain C (length=109) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLP
NIQAVLLPK
Ligand information
>8vfy Chain I (length=171) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ttgtgtctcctgctctgtcagcagggcactgtacttgctgataccaggga
atgtttgttcttaaataccatcattccggacgtgtttgccttggccagtt
ttccatgtacatgcagaaagaagtttggactgatcaatacagtcctctgc
ctttaaagcaataggaaagat
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8vfy Cryo-EM structure of FoxA1 in complex with ALBN1 nucleosome (class 1)
Resolution2.89 Å
Binding residue
(original residue number in PDB)
R11 R29 R42 V43 G44 A45 K75 T76 R77
Binding residue
(residue number reindexed from 1)
R2 R20 R33 V34 G35 A36 K66 T67 R68
External links
PDB RCSB:8vfy, PDBe:8vfy, PDBj:8vfy
PDBsum8vfy
PubMed39121853
UniProtP04908|H2A1B_HUMAN Histone H2A type 1-B/E (Gene Name=H2AC4)

[Back to BioLiP]