Structure of PDB 8tq8 Chain C Binding Site BS01
Receptor Information
>8tq8 Chain C (length=273) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARW
IEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGC
DVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAG
AAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTL
RCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPL
GKEQKYTCHVEHEGLPEPLTLRW
Ligand information
>8tq8 Chain E (length=10) Species:
11676
(Human immunodeficiency virus 1) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
RGPGRAFVTI
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8tq8
Experimental Structures of Antibody/MHC-I Complexes Reveal Details of Epitopes Overlooked by Computational Prediction.
Resolution
2.69 Å
Binding residue
(original residue number in PDB)
Y7 R62 E63 R66 N70 S73 F74 D77 W97 W114 T143 K146 W147 R155 Y159 W167
Binding residue
(residue number reindexed from 1)
Y6 R61 E62 R65 N69 S72 F73 D76 W96 W113 T142 K145 W146 R154 Y158 W166
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8tq8
,
PDBe:8tq8
,
PDBj:8tq8
PDBsum
8tq8
PubMed
38456672
UniProt
P01900
|HA12_MOUSE H-2 class I histocompatibility antigen, D-D alpha chain (Gene Name=H2-D1)
[
Back to BioLiP
]
