Structure of PDB 8sjd Chain C Binding Site BS01

Receptor Information
>8sjd Chain C (length=474) Species: 7370 (Musca domestica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVGAE
YGEHVNVEELLPSPITLSRKVTSDAKEKKALISREIKSAVEKDGASATID
LWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKA
IFSQFNVEDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEE
TPELNMPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTMLRSIL
DNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQTCSSP
SLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHY
TAFFFYPPALHMQQEKVAQIKEFCLSKMEDLEVCPSDEFEFYRKEIVILS
EDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEK
RNRIGQQTVDSLLFLNSFYKNFCK
Ligand information
>8sjd Chain J (length=55) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cttatctatgtggcttacgtttgcctgtggcttgttgaagttctctggtt
cacgc
Receptor-Ligand Complex Structure
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PDB8sjd Zinc-finger BED domains drive the formation of the active Hermes transpososome by asymmetric DNA binding.
Resolution5.1 Å
Binding residue
(original residue number in PDB)		F109 S110 R573
Binding residue
(residue number reindexed from 1)		F29 S30 R438
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0046872 metal ion binding
GO:0046983 protein dimerization activity
Biological Process
GO:0006357 regulation of transcription by RNA polymerase II
Cellular Component
GO:0005634 nucleus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8sjd, PDBe:8sjd, PDBj:8sjd
PDBsum8sjd
PubMed37491363
UniProtQ25438

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