Structure of PDB 8rdj Chain C Binding Site BS01

Receptor Information
>8rdj Chain C (length=1040) Species: 3728 (Sinapis alba) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDIDHEIEFQLFVETY
QLVEPLIKERDAVYESLTYSSELYVSAGLIWKTNRNMQEQRIFIGNIPLM
NSLGTFIVNGIYRVVINQILQSPGIYYQSELDHNGISVYTGTIISDWGGR
LELEIDKKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEIFLSF
LTDKEKKKIGSKENAILEFYQQFSCVGGDPIFSESLCKELQKKFFHQRCE
LGRIGRRNINWRLNLNIPQNNIFLLPRDILAAADHLIGMKFGMGTLDDMN
HLKNKRIRSVADLLQDQLGLALARLENVVKGTIGGAIRHKLIPTPQNLVT
STPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTAN
FRIRDIHPSHYGRICPIDTSEGINVGLIGSLSIHARIGDWGSLESPFYEL
VEKSKKAQIRMLFLSPSQDEYYMIAAGNSLALNRGIQEEQVVPARYRQEF
LTIAWEEVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPL
SRSEKCIVGTGLERQVALDSGVPAIAEHEGKILYTDTEKIILSGNENTLS
IPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNV
LVAYMPWEGYNFEDAVLISECLVYGDIYTSFHIRKYEIQTHVTTQGPERI
TKEIPHLEGRLLRNLDKNGIVMLGSWVETGDILVGKLTPSKETCLKLPIG
GRGRVIDVRWVQKKGGSSYNPEIIRVYISQKREIKVGDKVAGRHGNKGII
SKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDR
HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDG
RTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRSKQ
GGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV
Ligand information
Receptor-Ligand Complex Structure
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PDB8rdj Structure of the plant plastid-encoded RNA polymerase.
Resolution2.62 Å
Binding residue
(original residue number in PDB)		G399 R404 T405 N407 S799
Binding residue
(residue number reindexed from 1)		G392 R397 T398 N400 S767
Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0032549 ribonucleoside binding
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0009507 chloroplast

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8rdj, PDBe:8rdj, PDBj:8rdj
PDBsum8rdj
PubMed38428394
UniProtA0A6C0M5W1

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