Structure of PDB 8kbk Chain C Binding Site BS01

Receptor Information
>8kbk Chain C (length=104) Species: 256318 (metagenome) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SMTFGQALESLKRGHLVARKGWNGKGMFIFMRPEDSLPTNMIVNQVKSLP
ESFKRWVANNHGDSETDRIKFTAYLCMKAADGTIVNGWLASQTDMLANDW
VIVE
Ligand information
Ligand IDMF6
InChIInChI=1S/C15H21N5O13P2/c16-12-7-13(18-3-17-12)20(4-19-7)14-11-9(22)6(30-14)2-29-35(26,27)33-34(24,25)28-1-5-8(21)10(23)15(31-5)32-11/h3-6,8-11,14-15,21-23H,1-2H2,(H,24,25)(H,26,27)(H2,16,17,18)/t5-,6-,8-,9-,10-,11-,14-,15+/m1/s1
InChIKeyFWMYLCHFFTZWAN-ZQSHOCFMSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)C3C4C(C(O3)COP(=O)(OP(=O)(OCC5C(C(C(O5)O4)O)O)O)O)O)N
CACTVS 3.385Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH](O[CH]3[CH]4O)[CH](O)[CH]5O
ACDLabs 12.01Nc1ncnc2c1ncn2C1OC2COP(=O)(O)OP(=O)(O)OCC3OC(OC1C2O)C(O)C3O
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)[C@H]3[C@H]4[C@@H]([C@H](O3)COP(=O)(OP(=O)(OC[C@@H]5[C@H]([C@H]([C@@H](O5)O4)O)O)O)O)O)N
CACTVS 3.385Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@@H](O[C@@H]3[C@@H]4O)[C@H](O)[C@@H]5O
FormulaC15 H21 N5 O13 P2
Name(1S,3R,4R,6R,9S,11R,14R,15S,16R,18R)-4-(6-amino-9H-purin-9-yl)-9,11,15,16,18-pentahydroxy-2,5,8,10,12,17-hexaoxa-9lambda~5~,11lambda~5~-diphosphatricyclo[12.2.1.1~3,6~]octadecane-9,11-dione;
1'-2' gcADPR
ChEMBL
DrugBank
ZINC
PDB chain8kbk Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8kbk Structure of AcrIIA7 complexed with 1',2'-cADPR and cGG
Resolution2.28 Å
Binding residue
(original residue number in PDB)
W21 N22 G23 M26 M76 V84 L88 D93
Binding residue
(residue number reindexed from 1)
W22 N23 G24 M27 M77 V85 L89 D94
Annotation score1
External links