Structure of PDB 8jye Chain C Binding Site BS01
Receptor Information
>8jye Chain C (length=181) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KALFKPADVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYC
VLGCESFISGRHYWEVEVGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTM
GLTDGNKYRTLTEPRTNLKLPKPPKKVGVFLDYETGDISFYNAVDGSHIH
TFLDVSFSEALYPVFRILTLEPTALTICPAL
Ligand information
Ligand ID
H6P
InChI
InChI=1S/C5H12O8P2/c1-5(4-6)2-3-12-15(10,11)13-14(7,8)9/h2,6H,3-4H2,1H3,(H,10,11)(H2,7,8,9)/b5-2+
InChIKey
MDSIZRKJVDMQOQ-GORDUTHDSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.2
CC(=CCOP(=O)(O)OP(=O)(O)O)CO
ACDLabs 12.01
O=P(O)(O)OP(=O)(OC\C=C(/C)CO)O
CACTVS 3.370
CC(CO)=CCO[P](O)(=O)O[P](O)(O)=O
OpenEye OEToolkits 1.7.2
C/C(=C\CO[P@@](=O)(O)OP(=O)(O)O)/CO
CACTVS 3.370
C\C(CO)=C/CO[P](O)(=O)O[P](O)(O)=O
Formula
C5 H12 O8 P2
Name
(2E)-4-hydroxy-3-methylbut-2-en-1-yl trihydrogen diphosphate
ChEMBL
CHEMBL145233
DrugBank
ZINC
ZINC000008436838
PDB chain
8jye Chain C Residue 504 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8jye
Phosphoantigens glue butyrophilin 3A1 and 2A1 to activate V gamma 9V delta 2 T cells.
Resolution
2.18 Å
Binding residue
(original residue number in PDB)
W350 H351 Y352 W391 R412 R418 R469 L471
Binding residue
(residue number reindexed from 1)
W47 H48 Y49 W88 R109 R115 R166 L168
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8jye
,
PDBe:8jye
,
PDBj:8jye
PDBsum
8jye
PubMed
37674084
UniProt
O00481
|BT3A1_HUMAN Butyrophilin subfamily 3 member A1 (Gene Name=BTN3A1)
[
Back to BioLiP
]