Structure of PDB 8gj1 Chain C Binding Site BS01

Receptor Information
>8gj1 Chain C (length=367) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKT
SIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKF
LLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRA
LQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSL
VEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL
GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMT
LLRALAFHPRMPLPEPE
Ligand information
>8gj1 Chain F (length=29) Species: 83333 (Escherichia coli K-12) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
TSRRDWQLQQLGITQWSLRRPGALQGEIA
Receptor-Ligand Complex Structure
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PDB8gj1 Structural characterisation of the complete cycle of sliding clamp loading in E. coli
Resolution3.0 Å
Binding residue
(original residue number in PDB)
Q296 L297 P321 P322 F359
Binding residue
(residue number reindexed from 1)
Q294 L295 P319 P320 F357
Enzymatic activity
Enzyme Commision number 2.7.7.7: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006260 DNA replication
GO:0006261 DNA-templated DNA replication
GO:0071897 DNA biosynthetic process
GO:0075523 viral translational frameshifting
Cellular Component
GO:0009360 DNA polymerase III complex
GO:0030894 replisome
GO:0043846 DNA polymerase III, clamp loader complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:8gj1, PDBe:8gj1, PDBj:8gj1
PDBsum8gj1
PubMed
UniProtP06710|DPO3X_ECOLI DNA polymerase III subunit tau (Gene Name=dnaX)

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