Structure of PDB 8dqn Chain C Binding Site BS01

Receptor Information
>8dqn Chain C (length=388) Species: 998674 (Leucothrix mucor DSM 2157) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TGLTILRNANVYAPQPLGLKTVLVGGGKILAITDEALELPASIVADDIDL
QGRILTPGFIDAHAHITGGGGEAGFATQVPPVPLSQFTAFGVTTVVGLLG
TDDTTRSTGNLLSRVYGLREEGMSAYCWTGGYHYPLTTLMGSAREDIVYM
EPIIGVGEFAISDHRSSQPQFEEVIRIASDAHVAGLMTGKAGIVHFHLGD
GSRKLALIKRALAETELPARVFNPTHVNRNKPLFDEACEMLSQGIYIDIT
AFPDDAVDDGWSAAEALLLAKERGCPLKQITISSDGGGCMPAFDASGAVV
AMDFGRSETLLATLKTVTAQGMALEDVLSSLTANVAHLLRLPAKGKIATG
ADADLLVLDADYSINDVMALGRWHLRDKALIMKGTFEE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8dqn Chain C Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8dqn Bioinformatics of cyanophycin metabolism genes and characterization of promiscuous isoaspartyl dipeptidases that catalyze the final step of cyanophycin degradation.
Resolution1.8 Å
Binding residue
(original residue number in PDB)
E159 H198 H227
Binding residue
(residue number reindexed from 1)
E158 H197 H226
Annotation score4
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sat Nov 30 15:20:08 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8dqn', asym_id = 'C', bs = 'BS01', title = 'Bioinformatics of cyanophycin metabolism genes a...alyze the final step of cyanophycin degradation. '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8dqn', asym_id='C', bs='BS01', title='Bioinformatics of cyanophycin metabolism genes a...alyze the final step of cyanophycin degradation. ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008798,0016787,0016810', uniprot = '', pdbid = '8dqn', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008798,0016787,0016810', uniprot='', pdbid='8dqn', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>