Structure of PDB 8axf Chain C Binding Site BS01

Receptor Information
>8axf Chain C (length=262) Species: 1980427 (Emaravirus fici) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SDLKPIDVEVQAFTSASQNISNFTLHKYRNICHVDTCAAHLSKSKENKEK
LQARNLRLIVSSNEFLVVVKELNDSTVDNVVSFNKACAIMSAGVLKHTFD
EEFDWKLSKYVKTNNTTKVIPDVKIINRLAGQMGLSAGNPYYWMIVPGYE
FLYELYPAEVLAYTLVRLQYRKNLNIPDSMTDADIVSSLVMKMNRIHKLE
QTSFDEALNLIGKDNVSEAYVELARDIGSTSKTKRNDEAILKFRELIASF
LPALEADRIASA
Ligand information
>8axf Chain Q (length=42) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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Receptor-Ligand Complex Structure
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PDB8axf RNA Encapsulation Mode and Evolutionary Insights from the Crystal Structure of Emaravirus Nucleoprotein.
Resolution2.54 Å
Binding residue
(original residue number in PDB)		Q68 K95 K120 E121 N123 S132 N134 K135 I176 R178 L179 G181 Q182 P197 F201 R217 L224 N225 P227 M230 M241 K242 N244 R245 G278 T280 K282 R285
Binding residue
(residue number reindexed from 1)		Q18 K45 K70 E71 N73 S82 N84 K85 I126 R128 L129 G131 Q132 P147 F151 R167 L174 N175 P177 M180 M191 K192 N194 R195 G228 T230 K232 R235
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019013 viral nucleocapsid

View graph for
Cellular Component
External links
PDB RCSB:8axf, PDBe:8axf, PDBj:8axf
PDBsum8axf
PubMed37039649
UniProtI2FFM8

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