Structure of PDB 7zpf Chain C Binding Site BS01

Receptor Information
>7zpf Chain C (length=445) Species: 38294 (Photobacterium damselae subsp. piscicida) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KPDASDDKYADYVVRLGSEHPLNHTQIIELSSAVSRAVLLSYPNIIDRYT
AAATEYTVIDALFHSPTFRHIVSFGLHNQQENLGHIRYTNEYEINNNRED
EFSLVSEVSYDDIKSSNAQQVPLVAFYEAREDRATGTPIVNMGVAPSLFS
GRYSWWQEALIHEIVHHVTGSSDTHEENKQGPTEILAQMVAAELHWAIPT
FKGYSDPARVEAIQERDFHSLLNMFQRHGSELGFLFTRLATIAKGKKASP
DFGTLTSFCSEGISSFPKYPDHDFNGGGAFFLVECTFDVLNRIEPVDDSI
KFEGGNLLIKNDFKNLNLRVAQLSFLNAKKGSGFYRKNWDSWKSWPYGIT
FNDGSFSIGFSSRKHINDNTKDDNFVKLNAGQMFFDKNKRPVALVITEGW
SYIYKDGKWHYEAQDDWDQRLFKDSTLSLDPHAPQFINLEHHHHH
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7zpf Chain C Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7zpf 3D structure of the NF-kB-targeting toxin AIP56 and characterization of determinants required for low pH-induced conformational changes, membrane interaction and translocation
Resolution2.54 Å
Binding residue
(original residue number in PDB)
H165 H169 D176
Binding residue
(residue number reindexed from 1)
H162 H166 D173
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:7zpf, PDBe:7zpf, PDBj:7zpf
PDBsum7zpf
PubMed37973928
UniProtQ2VL32

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