Structure of PDB 7zb0 Chain C Binding Site BS01

Receptor Information

>7zb0 Chain C (length=706) Species: 72120 (Omphalotus olearius)

PGWGPYPPVERDETSAITYSSKLHGSVTVRDPYSQLEVPFEDSEETKAFV
HSQRKFARTYLDENPDREAWLETLKKSWNYRRFSALKPESDGHYYFEYND
GLQSQLSLYRVRMGEEDTVLTESGPGGELFFNPNLLSLALTGFVMSPCGN
YWAYGVHGSDWMSIYVRKTSSPHLPSGKDPGRMNDKIRHVRFFIVSWTSD
SKGFFYSRYPPEDNAPAMNCMVYYHRIGEDQESDVLVHEDPEHPFWISSV
QLTPSGRYILFAASRDASHTQLVKIADLHENDIGTNMKWKNLHDPWEARF
TIVGDEGSKIYFMTNLKAKNYKVATFDANHPDEGLTTLIAEDPNAFLVSA
SIHAQDKLLLVYLRNASHEIHIRDLTTGKPLGRIFEDLLGQFMVSGRRQD
NDIFVLFSSFLSPGTVYRYTFGEEKGYRSLFRAISIPGLNLDDFMTESVF
YPSKDGTSVHMFITRPKDVLLDGTSPVLQYGYGGFSLAMLPTFSLSTLLF
CKIYRAIYAIPNIRGGSEYGESWHREGMLDKKQNVFDDFNAATEWLIANK
YASKDRIAIRGGANGGVLTTACANQAPGLYRCVITIEGIIDMLRFPKFTF
GASWRSEYGDPEDPEDFDFIFKYSPYHNIPPPGDTVMPAMLFFTAAYDDR
VSPLHTFKHVAALQHNFPKGPNPCLMRIDKSTQEMLEETADEYSFIGKSM
GLTMQT

Ligand information

>7zb0 Chain G (length=5) Species: 72120 (Omphalotus olearius)

VIVVG

Receptor-Ligand Complex Structure

Structure summary

• PDB: 7zb0 Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
• Resolution: 2.47 Å
• Binding residue (original residue number in PDB): Y499 F502 A580 N581 F617 W621
• Binding residue (residue number reindexed from 1): Y482 F485 A563 N564 F600 W604

Gene Ontology

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UnboundLocalError

Python 3.6.8: /usr/bin/python3 Fri Nov 22 13:54:23 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1435     title=pdb2title(pdbid)

   1436     if bs.startswith("BS"):

=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)

   1438     else:

   1439         if lig3:

pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7zb0', asym_id = 'C', bs = 'BS01', title = 'Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides'

 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7zb0', asym_id='C', bs='BS01', title='Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides')

   1295         display_ec(ec,csaOrig,csaRenu)

   1296     if go:

=> 1297         display_go(go,uniprot,pdbid,asym_id)

   1298     return pubmed,uniprot

   1299 

global display_go = <function display_go>, go = '0004252,0006508,0008236', uniprot = '', pdbid = '7zb0', asym_id = 'C'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004252,0006508,0008236', uniprot='', pdbid='7zb0', asym_id='C')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>