Structure of PDB 7tqv Chain C Binding Site BS01

Receptor Information
>7tqv Chain C (length=347) Species: 2697049 (Severe acute respiratory syndrome coronavirus 2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LEMSLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKT
TLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHIS
TIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGS
VKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQS
RNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEAIVYGDFSHSQLGG
LHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDL
LLDDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPK
Ligand information
>7tqv Chain G (length=33) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gguaguagguuguauaguaguaagaccagaccc
.................................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7tqv Flipped over U: structural basis for dsRNA cleavage by the SARS-CoV-2 endoribonuclease.
Resolution3.43 Å
Binding residue
(original residue number in PDB)		Q19 S148
Binding residue
(residue number reindexed from 1)		Q21 S150
Enzymatic activity
Enzyme Commision number 2.1.1.56: mRNA (guanine-N(7))-methyltransferase.
2.1.1.57: methyltransferase cap1.
2.7.7.48: RNA-directed RNA polymerase.
2.7.7.50: mRNA guanylyltransferase.
3.1.13.-
3.4.19.12: ubiquitinyl hydrolase 1.
3.4.22.-
3.4.22.69: SARS coronavirus main proteinase.
3.6.4.12: DNA helicase.
3.6.4.13: RNA helicase.
4.6.1.-
External links
PDB RCSB:7tqv, PDBe:7tqv, PDBj:7tqv
PDBsum7tqv
PubMed35801916
UniProtP0DTD1|R1AB_SARS2 Replicase polyprotein 1ab (Gene Name=rep)

[Back to BioLiP]