Structure of PDB 7ns5 Chain C Binding Site BS01

Receptor Information
>7ns5 Chain C (length=293) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IITLPRFIIEHQFTLVLNALQFAFKFVSHTIRRAELVNLVGLAQKKLDVL
GDEIFINAMRASGIIKVLVSEEQEDLIVFGSYAVCCDPIDGSSNLDAGVS
VGTIASIFRLVLRCGKEMVAACYAMYGSSTHLVLTLGDGVDGFTLDTNLG
EFILTHPNLRIPPQKAIYSINEGNTLYWNETIRTFIEKVKQPQADNNNKP
FSARYVGSMVADVHRTFLYGGLFAYPCDKKSPNGKLRLLYEAFPMAFLME
QAGGKAVNDRGERILDLVPSHIHDKSSIWLGSSGEIDKFLDHI
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain7ns5 Chain C Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7ns5 GID E3 ligase supramolecular chelate assembly configures multipronged ubiquitin targeting of an oligomeric metabolic enzyme.
Resolution1.95 Å
Binding residue
(original residue number in PDB)
E108 D128 D131 E292
Binding residue
(residue number reindexed from 1)
E71 D87 D90 E241
Annotation score1
Enzymatic activity
Enzyme Commision number 3.1.3.11: fructose-bisphosphatase.
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0016791 phosphatase activity
GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity
GO:0042578 phosphoric ester hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0005986 sucrose biosynthetic process
GO:0006000 fructose metabolic process
GO:0006002 fructose 6-phosphate metabolic process
GO:0006094 gluconeogenesis
GO:0030388 fructose 1,6-bisphosphate metabolic process
GO:0072593 reactive oxygen species metabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0042597 periplasmic space

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7ns5, PDBe:7ns5, PDBj:7ns5
PDBsum7ns5
PubMed33905682
UniProtP09201|F16P_YEAST Fructose-1,6-bisphosphatase (Gene Name=FBP1)

[Back to BioLiP]