Structure of PDB 7h8c Chain C Binding Site BS01
Receptor Information
>7h8c Chain C (length=163) Species:
37124
(Chikungunya virus) [
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GAMAPSYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKKWPESFKN
SATPVGTAKTVMCGTYPVIHAVGPNFSNYTESEGDRELAAAYREVAKEVT
RLGVNSVAIPLLSTGVYSGGKDRLTQSLNHLFTAMDSTDADVVIYCRDKE
WEKKISEAIQMRT
Ligand information
Ligand ID
XJV
InChI
InChI=1S/C3H6N2O/c6-3-4-1-2-5-3/h1-2H2,(H2,4,5,6)
InChIKey
YAMHXTCMCPHKLN-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
CACTVS 3.385
O=C1NCCN1
OpenEye OEToolkits 2.0.7
C1CNC(=O)N1
Formula
C3 H6 N2 O
Name
imidazolidin-2-one
ChEMBL
CHEMBL12034
DrugBank
ZINC
ZINC000001666720
PDB chain
7h8c Chain C Residue 306 [
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Receptor-Ligand Complex Structure
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PDB
7h8c
Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain
Resolution
1.52 Å
Binding residue
(original residue number in PDB)
A22 G32 V33 L108
Binding residue
(residue number reindexed from 1)
A25 G35 V36 L111
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.1.1.-
2.7.7.-
2.7.7.19
: polynucleotide adenylyltransferase.
2.7.7.48
: RNA-directed RNA polymerase.
3.1.3.84
: ADP-ribose 1''-phosphate phosphatase.
3.4.22.-
3.6.1.15
: nucleoside-triphosphate phosphatase.
3.6.1.74
: mRNA 5'-phosphatase.
3.6.4.13
: RNA helicase.
External links
PDB
RCSB:7h8c
,
PDBe:7h8c
,
PDBj:7h8c
PDBsum
7h8c
PubMed
UniProt
Q8JUX6
|POLN_CHIKS Polyprotein P1234
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