Structure of PDB 7fi3 Chain C Binding Site BS01

Receptor Information

>7fi3 Chain C (length=724) Species: 69014 (Thermococcus kodakarensis KOD1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SVLKTVIYSSSGALFMGVWNPSSSGYSDTYSRRIADLVFDSGIPYGIDGV
PHPYHCHVVDYKSDVTVPEDAVIFNSTTDTWVAAHAGETAKTYARIECDR
PYFHDGHKLSAADVMYSLAWSWEWTTQDGDDDPYYDASEADWSGEYMNTI
LGIKLVEQTDDRMVFDVYHNHYFPASEIMTAAYVVPFTGTPWQLWYAMSE
LVAHNPKYSWSESSEDVEQLDQINPSHAQAIKEKLLELKQSKPIPEFLKP
YIEDENAATAAYDSIAKFMDEHNHAVIGQGPYYVDEYQPENLFVRIKKFD
KWTIPAFAEPEYQVDPYYKTIEVYGIQNEDTAILEVANGHYDILWYPFAA
YRFTGLSDEQRANIKLYRSTSAFGDIVWNPVHDQDNPYVITVGDKKYFNP
FAVRKVRFAIQYMVNRAYITQNIFQGSAGPMFTPWTSTETGFEYVRPVVD
AFGLTEQSDEDLAMKLFEEGMQEAAQELAKMGYELKKGDDGKWYFNGEPV
KVVGLGRVEDERKDVATYIVEEVMKKLGFDAEAKIVDRRTASGTVYTSDP
SSYQWNFYTEGWVSSSNVKFSTTRIIQYYSSYWYAPGLVGWKWTPENTQR
VTMEEVLKFLGNGDIQAGLDSLGLSYYNTVDKIQPLLNWTADDFALVIYS
GEANGVKMDSEDKYWDFNRLGTAIGIYEGYRTFLYENWEFYAASKDIEIK
LVDPVAGLASDWAIRSARPVVEHH

Ligand information

>7fi3 Chain G (length=5) Species: 32630 (synthetic construct) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

AAAAA

Receptor-Ligand Complex Structure

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Structure summary

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PDB	7fi3 Structural basis for peptide recognition by archaeal oligopeptide permease A.
Resolution	2.3 Å
Binding residue (original residue number in PDB)	S60 R540 R545 G594 W595 V596 Q610
Binding residue (residue number reindexed from 1)	S27 R507 R512 G561 W562 V563 Q577

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:7fi3, PDBe:7fi3, PDBj:7fi3
PDBsum	7fi3
PubMed	35170084
UniProt	Q5JJ92

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