Structure of PDB 7f3i Chain C Binding Site BS01
Receptor Information
>7f3i Chain C (length=91) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KPVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLR
SVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNR
Ligand information
>7f3i Chain D (length=5) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gucuc
.....
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7f3i
Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P212121
Resolution
2.25 Å
Binding residue
(original residue number in PDB)
W100 F101 N102 V103 R104 N105 F109 F120 H122 K153 G154 E156 Y173
Binding residue
(residue number reindexed from 1)
W14 F15 N16 V17 R18 N19 F23 F34 H36 K67 G68 E70 Y87
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
View graph for
Molecular Function
External links
PDB
RCSB:7f3i
,
PDBe:7f3i
,
PDBj:7f3i
PDBsum
7f3i
PubMed
UniProt
Q9Y2T7
|YBOX2_HUMAN Y-box-binding protein 2 (Gene Name=YBX2)
[
Back to BioLiP
]