Structure of PDB 7d1a Chain C Binding Site BS01 |
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| >7d1a Chain A (length=692)
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gugcgcccagauaggguguuaagucaaguaguuuaagguacuacucugua
agauaacacagaaaacagccaaccuaaccgaaaagcgaaagcugauacgg
gaacagagcacgguuggaaagcgaugaguuaccuaaagacaaucggguac
gacugagucgcaauguuaaucagauauaagguauaaguuguguuuacuga
acgcaaguuucuaauuucgguuaugugucgauagaggaaagugucugaaa
ccucuaguacaaagaaagguaaguuaugguuguggacuuaucuguuauca
ccacauuuguacaaucuguaggagaaccuaugggaacgaaacgaaagcga
ugccgagaaucugaauuuaccaagacuuaacacuaacuggggauacccua
aacaagaaugccuaaaggaggaaaaaggcuauagcacuagagcuugaaaa
ucuugcaaggguacggaguacucguaguagucugagaaggguaacgcccu
uuacauggcaaagggguacaguuauuguguacuaaaauuaaaaauugauu
agggaggaaaaccucaaaccaacaauggcaauuuuagacaauaacagagc
cguauacuccgagagggguacguacgguucccgaagaggguggugcaaac
cagucacaguaaugugaacaaggcgguaccucccuacuucac |
.....<<<<.....<<<<<<<<<<<..<<<<.........>>>><<<<..
....(((.>>>>.<<<<.<<<<<<...<....<.<<....>>>.....>.
...........>>>>>>...<<<<..<<..<.<...((.......>.>..
..>>...>>>>..>>>>...<<<<.....<<<<..<<<.......>>>..
..<<...<<<<.......<<.......>>...............))....
.......<<<<<<....<<<<<<<<.........>>>>>>>>.)))....
.....>>>>>>......<<<<......>>>>......>>>>.....>>..
>>>>.....>>>>..........>>>>>>>>>>>...>>>>..<<<<...
..<.......<<<..>>>........<<<<..<....>..>>>>......
....>...>>.>>....<<.<<<.............<<<<<.....>>>>
>...........>>>..>>.<<<<<<<.......................
.....<<.....>>........................>>>>>>>.<<<<
<<<<<<<<<<....>>>>>..>>>>>>>>>..<<<.<<<<.<..<<....
.......<....>............>>...>>>>>..>>>.. |
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| PDB | 7d1a Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing. |
| Resolution | 3.8 Å |
Binding residue
(original residue number in PDB) | A6 R10 K13 N14 E17 N18 E21 Y29 R32 P33 Y36 Y37 L74 Y79 R154 K185 M186 S187 Q188 Y198 E200 W202 Q203 Y204 R247 I248 T249 P250 E251 H349 V375 R378 Q406 K407 D409 F413 N450 Y454 W489 |
Binding residue
(residue number reindexed from 1) | A3 R7 K10 N11 E14 N15 E18 Y26 R29 P30 Y33 Y34 L71 Y76 R151 K182 M183 S184 Q185 Y195 E197 W199 Q200 Y201 R244 I245 T246 P247 E248 H296 V311 R314 Q342 K343 D345 F349 N386 Y390 W425 |
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